BIODEGRADATION OF POLYCYCLIC AROMATIC HYDROCARBONS: A REVIEW

Main Article Content

Authors

E.R. Faizulina

Scientific and Production Center of Microbiology and Virology, 105, Bogenbai batyr str., Almaty, 050010, Kazakhstan

S.A. Aitkeldiyeva

Scientific and Production Center of Microbiology and Virology, 105, Bogenbai batyr str., Almaty, 050010, Kazakhstan

L.G. Tatarkina

Scientific and Production Center of Microbiology and Virology, 105, Bogenbai batyr str., Almaty, 050010, Kazakhstan

O.N. Auezova

Scientific and Production Center of Microbiology and Virology, 105, Bogenbai batyr str., Almaty, 050010, Kazakhstan

Abstract

This review paper is devoted to polycyclic aromatic hydrocarbons (PAHs, arenes), high molecular organic compounds, in the structure of which benzene rings are present. PAHs are considered to be priority pollutants, since many of them possess carcinogenic and mutagenic activity and pose a danger to human health. The paper discusses the technologies for the removal of PAHs from the environment, in which bioremediation is one of the most promising and safest options. Various genera of bacteria, fungi and algae that are capable of highly efficient biodegradation of PAHs are characterized. In addition, the review discusses the extent and mechanisms of action of PAHs on various components of the environment. The information is provided on the main sources of PAHs, role of abiotic and biotic factors in the biodegradation of PAHs in the environment, and mechanisms for the degradation of PAHs by microorganisms are considered.

Keywords

polycyclic aromatic hydrocarbons (PAHs), sources of PAHs, biodegradation of PAHs

Article Details

References

Okere K.T. Semple Biodegradation of PAHs in ‘Pristine’ soils from different climatic regions. J. Bioremed. Biodegr., 2011, vol. 27, pp. 1-11. Crossref.

Duan L., Naidu R., Thavamani P., Meaklim J., Megharaj M. Managing long-term polycyclic aromatic hydrocarbon contaminated soils: a risk-based approach. Environ. Sci. Pollut. Res., 2015, vol. 22, no. 12, pp. 8927-9841. Crossref.

Harmsen J., Rietra RPJJ 25 years monitoring of PAHs and petroleum hydrocarbons biodegradation in soil. Chemosphere, 2018, vol. 207, pp. 229-238. Crossref.

Rovinskij F.YA., Teplickaya T.A., Alekseeva T.A. Fonovyj monitoring policiklicheskih aromaticheskih uglevodorodov [Background monitoring of polycyclic aromatic hydrocarbons]. Leningrad: Gidrometeoizdat, 1988, 224 p.

Chandra S., Sharma R., Singh K., Sharma A. Application of bioremediation technology in the environment contaminated with petroleum hydrocarbon. Ann. Microbiol., 2013, vol. 63, pp. 417-431. Crossref.

Chukov S.N., Lodygin N.E., Gabov D.N., Beznosikov V.A. Policiklicheskie aromaticheskie uglevodorody v pochvah Sankt-Peterburga [Polycyclic aromatic hydrocarbons in the soils of St. Petersburg]. Vestnik SPbGU - SPbSU Bulletin, 2016, ser. 3, iss. 1, pp. 119-129.

Gennadiev A.N., Pikovskij YU.I., Florovskaya V.N. i dr. Geohimiya policiklicheskih aromaticheskih uglevodorodov v gornyh porodah i pochvah [Geochemistry of polycyclic aromatic hydrocarbons in rocks]. Moscow, MSU publ., 1996, 196 p.

Pikovskij YU.I. Prirodnye i tekhnogennye potoki uglevodorodov v okruzhayushchej srede [Natural and technogenic flows of hydrocarbons in the environment]. Moscow, MSU publ., 1993, 208 p.

Kuppusamy S., Thavamani P., Venkateswarlu K., Yong Bok Lee, Naidu R., Megharaj M. Remediation approaches for polycyclic aromatic hydrocarbons (PAHs) contaminated soils: Technological constraints, emerging trends and future directions. Chemosphere, 2017, vol. 168, pp. 944-968. Crossref.

Haritash A. K., Kaushik C. P. Biodegradation aspects of Polycyclic Aromatic Hydrocarbons (PAHs): A review. Journal of Hazardous Materials, 2009, vol. 169, no. 1-3, pp. 1-15. Crossref.

Oberoi A.S., Philip L, Bhallamudi S.M. Biodegradation of Various Aromatic Compounds by Enriched Bacterial Cultures: Part A–Monocyclic and Polycyclic Aromatic Hydrocarbons. Appl Biochem Biotechnol, 2015, vol. 176, pp. 1870-1888. Crossref.

Wilson S.C., Jones K.C. Bioremediation of soil contaminated with polynuclear aromatic hydrocarbons (PAHs): a review. Environ. Pollut., 1993, vol. 81, no. 3, pp. 229-249. 15091809.

Alegbeleye O.O., Opeolu B.O., Angela Jackson V.A. Polycyclic Aromatic Hydrocarbons: A Critical Review of Environmental Occurrence and Bioremediation. Environmental Management, 2017, vol. 60, pp. 758-783. Crossref.

Sutherland J.B., Rafll F., Khan A.A., Cerniglia C.E. Mechanisms of polycyclic aromatic hydrocarbon degradation. Microbial Transformation and Degradation of Toxic Organic Chemicals. New York, Willey-Liss, Inc., 1995, pp. 269-306. ISBN No.: 0–471–52109–4.

Malawska M., Wiołkomirski B. An analysis of soil and plant (Taraxacum officinale) contamination with heavy metals and polycyclic aromatic hydrocarbons (PAHs) in the area of the railway junction Ilawa Glowna, Poland. Water Air Soil Pollut., 2001, vol. 127, pp. 339-349. Crossref.

Kanaly R.A., Harayama S. Biodegradation of high-molecular-weight polycyclic aromatic hydrocarbons by bacteria. J. Bacteriol., 2000, vol. 182, pp. 2059-2067. Crossref.

Wilcke W. Global patterns of polycyclic aromatic hydrocarbons (PAHs) in soil. Geoderma, 2007, vol. 141, pp. 157-166. Crossref.

Loganathan B.G., Lam P.K.S. Global Contamination Trends of Persistent Organic Chemicals. US: CRC Press, Boca Raton, 2011, 656 p.

Usman M., Hanna K., Haderlein S. Fenton oxidation to remediate PAHs in contaminated soils: A critical review of major limitations and counter-strategies. Science of The Total Environment, 2016, vol. 569-570, pp. 179-190. Crossref.

Gennadiev A.N., Pikovskij YU.I., CHernyanskij S.S., Alekseeva T.A. Faktory i formy nakopleniya policiklicheskih aromaticheskih uglevodorodov v pochvah pri tekhnogennom zagryaznenii [Factors and forms of accumulation of polycyclic aromatic hydrocarbons in soils under technogenic pollution]. Pochvovedenie - Soil Science, 2004, no. 7, pp.70-76.

Nadarajah N., Van Hamme J., Pannu J., Singh A., Ward O. Enhanced transformation of polycyclic aromatic hydrocarbons using a combined Fenton's reagent, microbial treatment and surfactants. Appl Microbiol Biotechnol., 2002, vol. 59, pp. 540-544. Crossref.

Yateem A., Balba M. T., Nawawy A. S., Al-Awandhi N. Plants-associated microflora and the remediation of oil-contaminated soil. Int. J. Phytorem., 2000, vol. 2, pp. 183-191. Crossref.

James G. Speight, Nour Shafik El-Gendy Bioremediation of Contaminated Soil. Introduction to Petroleum Biotechnology. Cambridge, MA: Gulf Professional Publishing, 2018, pp. 361-417.

Timergazina I.F., Perekhodova L.S. K probleme biologicheskogo okisleniya nefti i nefteproduktov uglevodorodokislyayushchimi mikroorganizmami [To the problem of biological oxidation of oil and oil products by hydrocarbon oxidizing microorganisms]. Neftegazovaya geologiya. Teoriya i praktika - Oil and gas geology. Theory and practice, 2012, vol. 7, no. 1, pp. 1-28.

Abbasian F., Lockington R., Mallavarapu M., Naidu R. A comprehensive review of aliphatic hydrocarbon biodegradation by bacteria. Appl. Biochem. Biotechnol., 2015, vol. 176, pp. 670-699. Crossref.

Meckenstock R.U., Boll M., Mouttaki H., Koelschbach J.S., Tarouco P.C., Weyrauch P., Dong X., Himmelberg A.M. Anaerobic degradation of benzene and polycyclic aromatic hydrocarbons. J. Mol. Microbiol. Biotechnol., 2016, vol. 26, pp. 92-118. Crossref.

Atlas R.M. Microbial hydrocarbon degradation-bioremediation of oil spills. J. Chem. Technol. Biotechnol., 1991, vol. 52, pp. 149-156. Crossref.

Varjani S.J., Upasani V.N. Biodegradation of petroleum hydrocarbons by oleophilic strain of Pseudomonas aeruginosa NCIM 5514. Bioresour. Technol., 2016, vol. 222, pp. 195-201. Crossref.

Wilkes H., Buckel W., Golding B.T., Rabus R. Metabolism of hydrocarbons in n-Alkane utilizing anaerobic bacteria. J. Mol. Microbiol. Biotechnol., 2016, vol. 26, pp. 138-151. Crossref.

Rabinovich M.L., Bolobova A.B., Vasil'chenko JI.G. Razlozhenie prirodnyh aromaticheskih struktur i ksenobiotikov gribami (obzor) [Decomposition of natural aromatic structures and xenobiotics by fungi (review)]. Prikladnaya biohimiya i mikrobiologiya - Applied Biochemistry and Microbiology, 2004, vol. 40, no. 1, pp. 5-23.

Safonova E., Kvitco К.L., Kuschk P., Moder M., Reisser W. Biodegradation of phenanthrene by the green aiga Scenedesmus obliquus ES-55. Engineering in Life Sciences, 2005, vol. 5, no. 3, pp. 234-239. Crossref.

Xiaohui Zhao, Fuqiang Fan, Huaidong Zhou, Panwei Zhang, Gaofeng Zhao Microbial diversity and activity of an aged soil contaminated by polycyclic aromatic hydrocarbons. Bioprocess and Biosystems Engineering, 2018. Crossref.

Arulazhagan P., Al‑Shekri K.,•Huda Q., Godon J.J.,•Basahi J.M., Jeyakumar D. Biodegradation of polycyclic aromatic hydrocarbons by an acidophilic Stenotrophomonas maltophilia strain AJH1 isolated from a mineral mining site in Saudi Arabia. Extremophiles, 2017, vol. 21, pp. 163-174. Crossref.

Anyanwu I.N., Semple K.T. Biodegradation of Phenanthrene-Nitrogen-Containing Analogues in Soil. Water Air Soil Pollut, 2015, vol. 226, pp. 252-262. Crossref.

Varjani S.J. Microbial degradation of petroleum hydrocarbons. Bioresource Technology, 2017, vol. 223, pp. 277-286. Crossref.

Gupta S., Pathak B., Fulekar M.H. Molecular approaches for biodegradation of polycyclic aromatic hydrocarbon compounds: a review. Rev Environ Sci Biotechnol, 2015, vol. 14, pp. 241-269. Crossref.

Atlas R.M. Microbial degradation of petroleum hydrocarbons: an environmental perspective. Microbiol. Rev., 1981, vol. 45, no. 1, pp. 180-209. 7012571.

Boopathy R. Factors limiting bioremediation technologies. Bioresour. Technol., 2000, vol. 74, pp. 63-67. Crossref.

Sabate I., Vinas M., Solanas A.M. Laboratory scale bioremediation experiments on hydrocarbon-contaminated soil. Int. Biodeterior. Biodegrad., 2004, vol. 54, pp. 19-25. Crossref.

Aislabie J., Saul D., Foght J. Bioremediation of hydrocarbon-contaminated polar soils. Extremophiles, 2006, vol. 10, pp. 171-179. Crossref.

Okoh A.I. Biodegradation alternative in the cleanup of petroleum hydrocarbon pollutants. Biotechnol. Mol. Biol. Rev., 2006, vol. 1, no. 2, pp. 38-50. URL.

Thamer M., Al-Kubaisi A.R., Zahraw Z., Abdullah H.A., Hindy I., Khadium A.A. Biodegradation of Kirkuk light crude oil by Bacillus thuringiensis, Northern of Iraq. Nat. Sci., 2013, vol. 5, no. 7, pp. 865-873. Crossref.

Leahy J.H., Colwell R. Microbial degradation of hydrocarbons in the environment. Micobiol. Rev., 1990, vol. 54, no. 3, pp. 305-315. 2215423.

Arulazhagan P., AlShekri1 K., Huda Q., Godon J.J., Basahi1 J.M., Jeyakumar D. Biodegradation of polycyclic aromatic hydrocarbons by an acidophilic Stenotrophomonas maltophilia strain AJH1 isolated from a mineral mining site in Saudi Arabia. Extremophiles, 2017, vol. 21, pp. 163-174. Crossref.

Rhykerd R. L., Weaver R. W. Influence of salinity on bioremediation of oil in soil. Environmental Pollution, 1995, vol. 90, no 1, pp. 127-130. 15091510.

Nzila A. Biodegradation of high-molecular-weight polycyclic aromatic hydrocarbons under anaerobic conditions: оverview of studies, proposed pathways and future perspectives. Environ Pollut., 2018, vol. 239, pp. 788-802. Crossref.

Gan X., Teng Y., Zhao L., Ren W., Chen W., Hao J., Christie P., Luo Y. Influencing mechanisms of hematite on benzo(a)pyrene degradation by the PAH-degrading bacterium Paracoccus sp. Strain HPD-2: insight from benzo(a)pyrene bioaccessibility and bacteria activity. J Hazard Mater., 2018, vol. 359, pp. 348-355. Crossref.

Jaekel U., Musat N., Adam B., Kuypers M., Grundmann O., Musat F. Anaerobic degradation of propane and butane by sulfate-reducing bacteria enriched from marine hydrocarbon cold seeps. ISME J., 2013, vol. 7, pp. 885-895. Crossref.

Boonchan S., Britz M.L., Stanley G.A. Degradation and mineralization of high-molecular-weight polycyclic aromatic hydrocarbons by defined fungal bacterial cocultures. Appl. Environ. Microbiol., 2000, vol. 66, no. 3, pp. 1007-1019. 10698765.

Cajthaml T., Möder M., Kacer P., Sasek V., Popp P. Study of fungal degradation products of polycyclic aromatic hydrocarbons using gas chromatography with ion trap mass spectrometry detection. J. Chromatogr. A., 2002, vol. 974, pp. 213-222. 12458938.

Nechaeva I.A. Biodegradaciya uglevodorodov nefti psihrotrofnymi mikroorganizmami-destruktorami. Diss. kand. biol. nauk [Biodegradation of petroleum hydrocarbons by psychotropic microorganisms-destructors. Cand. biol. science diss.]. Pushchino, 2009, 175 p.