DEVELOPMENT OF T-VECTOR FOR DIRECT CLONING OF PCR PRODUCTS

Main Article Content

Authors

D.A. Gritsenko

Institute of plant biology and biotechnology, Timiryazevstreet, 45, Almaty,050040,Kazakhstan
Institute of plant protection and quarantine, Kazybekbistreet, 1, Almaty, 050000,Kazakhstan

R.T. Kenzhebekova

Institute of plant biology and biotechnology, Timiryazevstreet, 45, Almaty,050040,Kazakhstan

N.D. Deryabina

Al-Farabi Kazakh National Universit, Al-Farabi Street, 71,Almaty,050000, Kazakhstan

N.N. Galiakparov

Institute of plant biology and biotechnology, Timiryazevstreet, 45, Almaty,050040,Kazakhstan
Institute of plant protection and quarantine, Kazybekbistreet, 1, Almaty, 050000,Kazakhstan

Abstract

Thermostable enzymes that lack3′ to 5′ exonuclease activity are able to add deoxyadenosine residues to 3′-overhangs in PCR-amplified products, thereby allowing direct cloning of PCR products into T-vectors. A T-vector for cloning of amplified products was created by inserting two Eam1105I restriction sites in the multiple cloning site of the plasmid pGEM‑3zf(+). The ‘excess’Eam1105I restriction site within theβ-lactamase gene was deleted by point mutation while maintaining the amino acid sequence. Addition of a spacer (282 nucleotides) between the Eam1105I sites increased the cleavage efficiency of the enzyme. The developed T-vector reduces the time and cost for cloning PCR products as compared to other methods involvingT-vector preparation with enzymatic addition of deoxythymidine to 3′-ends, primer design with suitable restriction sites, and restriction enzyme digestion of PCR products. The developed vector was used to clone the open reading frames of different sizes of grapevine virus A.

Keywords

T-vector, PCR products, cloning

Article Details

References

Kaufman D.L.,Evans G.A. Restriction endonuclease cleavage at the termini of PCR products.Biotechnique,1990,vol.9,pp. 306.2171587.

Holton T.A., Graham M.W. A simple and efficient method for direct cloning of PCR products using ddT-tailed vectors.Nucleic Acids Res, 1991, vol.19, pp.1156.2020554.

Cha J., Bishai W., Chandrasegaran S. New vectors for direct cloning of PCR products.Gene, 1993, vol. 136, pp.369-370.8294034.

Jo C., Jo S.A. A simple method to construct T-vectors using Xcm I cassettes amplified by nonspecific PCR. Plasmid, 2001, vol.45, pp. 37-40.11319930.

Kovalic D.J., Kwak H., Weisblum B. General method for direct cloning of DNA fragments generated by the polymerase chain reaction. Nucleic Acids Res, 1991, vol.19.1886782.

Yaofeng Zhao. Construction of a High Efficiency PCR Products Cloning T-vector Using pGEM-5zf (+).Avicenna J Med Biotechnol,1991, vol.1, pp. 37-39.23407719.

Shu-Ye Jiang, JeevanandamVanitha, Yanan Bai, Srinivasan Ramachandran.A Novel Binary T-vector with the GFP Reporter Gene for Promoter Characterization.PLoS One, 2014, vol.9, pp.1-11.10.1371/journal.pone.0107328.

Lacks S., Greenberg B. Complementary specificity of restriction endonucleases of Diplococcus pneumoniae with respect to DNA methylation. J. Mol. Biol, 1977, vol.114, pp. 153-168.20509.

FrogerA.Transformation of Plasmid DNA into E. coli Using the Heat Shock Method.J Vis Exp, 2007, vol. 2007, pp. 253.18997900.